Protein Viz

Module: visualization.protein_viz

Source: visualization/protein_viz.py

Overview

Protein visualization utilities.

This module provides visualization utilities for protein structures, including 3D visualization with py3Dmol and 2D plots for Ramachandran analysis.

Classes

ProteinVisualizer

class ProteinVisualizer

Functions

calculate_dihedral

def calculate_dihedral()

calculate_dihedral_angles

def calculate_dihedral_angles()

in_region

def in_region()

plot_ramachandran

def plot_ramachandran()

to_pdb_string

def to_pdb_string()

visualize_protein_structure

def visualize_protein_structure()

visualize_structure

def visualize_structure()

Module Statistics

• Classes: 1
• Functions: 7
• Imports: 6